Records and species by DwC rank column vs by AphiaID subtree

For each preset, counts records and species at the base resolution two ways: filtering the Darwin Core rank column ("<rank>" = '<name>') and filtering aphiaid by the recursive WoRMS subtree of the seed id. Where WoRMS files the name at a rank other than the column (e.g. Actinopterygii is a gigaclass; OBIS's class carries Teleostei), the rank column silently returns zero while the subtree finds the records.

Usage

calc_rank_vs_subtree(con, presets = obis_rank_presets(), res = H3T_RES_BASE)

Arguments

con

connection from obis_store_connect().

presets

data frame with label, rank, name, aphiaid; default obis_rank_presets().

res

resolution tier of occ_h3 to count on (default the base, 7).

Value

data frame with label, rank, name, aphiaid, records_rank, species_rank, records_tree, species_tree, ratio (records_rank / records_tree).